BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB003H10LP1|AL425204
(776 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1622 599 e-171
>3x_Contig1622
Length = 13445
Score = 599 bits (295), Expect = e-171
Identities = 308/315 (97%), Gaps = 1/315 (0%)
Strand = Plus / Plus
Query: 463 gcgagaaggatggccaactttattctttggttataaagcaaccttgagtmgggatctacc 522
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 1 gcgagaaggatggccaactttattctttggttataaagcaaccttgagtcgggatctacc 60
Query: 523 gttttctgggttacaatttgcattttatgagaaatttagacaacttgcattcgcagtaga 582
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gttttctgggttacaatttgcattttatgagaaatttagacaacttgcattcgcagtaga 120
Query: 583 gaataaaacgtttgatgaagatttatctctgagtaacgaaataattamcggtgctgctgc 642
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 121 gaataaaacgtttgatgaagatttatctctgagtaacgaaataattaccggtgctgctgc 180
Query: 643 aggtggtcttgctggtatmataacaactccattagatgttgtaaagacaagaatccagam 702
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aggtggtcttgctggtatcataacaactccattagatgttgtaaagacaagaatccagac 240
Query: 703 acagctamcagatatccctgaaaatagttctcagaatttaaagcagcaaacgttgacaaa 762
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 acagctaccagatatccctgaaaatagttctcagaatttaaagcagcaaacgttgacaaa 300
Query: 763 tt-cattamgaaagg 776
|| ||||| ||||||
Sbjct: 301 ttccattacgaaagg 315
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.41 0.716 1.33
Gapped
Lambda K H
1.41 0.716 1.33
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4115
Number of Sequences: 1807
Number of extensions: 4115
Number of successful extensions: 98
Number of sequences better than 1.0e-20: 1
length of query: 776
length of database: 10,358,551
effective HSP length: 16
effective length of query: 760
effective length of database: 10,329,639
effective search space: 7850525640
effective search space used: 7850525640
T: 0
A: 40
X1: 5 (10.2 bits)
X2: 14 (28.4 bits)
S1: 12 (24.9 bits)
S2: 49 (100.0 bits)